Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 HNRNPDP1-201ENST00000439535 754 ntBASIC17.5■□□□□ 0.39
MMP13P45452 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP13P45452 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP13P45452 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP13P45452 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.5■□□□□ 0.39
MMP13P45452 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP13P45452 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 AC148477.8-201ENST00000624298 468 ntBASIC17.5■□□□□ 0.39
MMP13P45452 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP13P45452 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
MMP13P45452 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP13P45452 AC092364.2-201ENST00000596710 2692 ntBASIC17.5■□□□□ 0.39
MMP13P45452 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MMP13P45452 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 AL365203.3-201ENST00000609742 2057 ntBASIC17.49■□□□□ 0.39
MMP13P45452 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MMP13P45452 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP13P45452 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP13P45452 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MMP13P45452 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 AL121894.2-201ENST00000602977 491 ntBASIC17.49■□□□□ 0.39
MMP13P45452 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
MMP13P45452 AL773604.1-201ENST00000617417 272 ntBASIC17.49■□□□□ 0.39
MMP13P45452 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP13P45452 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP13P45452 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP13P45452 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MMP13P45452 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 RPS2P28-201ENST00000314255 741 ntBASIC17.48■□□□□ 0.39
MMP13P45452 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.48■□□□□ 0.39
MMP13P45452 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.48■□□□□ 0.39
MMP13P45452 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
MMP13P45452 AC008735.5-201ENST00000623544 497 ntBASIC17.48■□□□□ 0.39
MMP13P45452 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
MMP13P45452 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP13P45452 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms