Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 AC129492.6-201ENST00000611383 1305 ntBASIC14.92□□□□□ -0.02
HOXC12P31275 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HOXC12P31275 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
HOXC12P31275 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC12P31275 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC12P31275 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.92□□□□□ -0.02
HOXC12P31275 CEND1P1-201ENST00000451006 455 ntBASIC14.92□□□□□ -0.02
HOXC12P31275 PAWRP1-201ENST00000451083 565 ntBASIC14.92□□□□□ -0.02
HOXC12P31275 COX20P2-201ENST00000452636 358 ntBASIC14.92□□□□□ -0.02
HOXC12P31275 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC12P31275 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.92□□□□□ -0.02
HOXC12P31275 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HOXC12P31275 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HOXC12P31275 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC12P31275 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
HOXC12P31275 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC12P31275 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC12P31275 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC12P31275 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC12P31275 AL513190.1-201ENST00000621254 727 ntBASIC14.91□□□□□ -0.02
HOXC12P31275 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 AC007064.4-201ENST00000637740 555 ntBASIC14.91□□□□□ -0.02
HOXC12P31275 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HOXC12P31275 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HOXC12P31275 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC12P31275 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HOXC12P31275 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms