Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.01■□□□□ 0.31
HLA-DQB2P05538 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 ALOX12P2-203ENST00000570921 1945 ntBASIC17■□□□□ 0.31
HLA-DQB2P05538 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 AL022342.1-201ENST00000400363 863 ntBASIC17■□□□□ 0.31
HLA-DQB2P05538 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 MED15P5-201ENST00000423150 992 ntBASIC17■□□□□ 0.31
HLA-DQB2P05538 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQB2P05538 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQB2P05538 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 AL645728.2-201ENST00000641974 660 ntBASIC17■□□□□ 0.31
HLA-DQB2P05538 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 AL031731.1-201ENST00000642131 2094 ntBASIC17■□□□□ 0.31
HLA-DQB2P05538 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17■□□□□ 0.31
HLA-DQB2P05538 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQB2P05538 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB2P05538 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB2P05538 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 GGT4P-201ENST00000623672 1708 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AL031432.2-201ENST00000566714 459 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AL928711.1-201ENST00000570165 459 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC023141.13-201ENST00000604991 943 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC027601.4-201ENST00000611259 610 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC004877.2-201ENST00000623941 599 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 AC124067.4-201ENST00000519691 2379 ntBASIC16.99■□□□□ 0.31
HLA-DQB2P05538 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB2P05538 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms