Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.49■□□□□ 0.23
CDC7O00311 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.49■□□□□ 0.23
CDC7O00311 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.49■□□□□ 0.23
CDC7O00311 RN7SL510P-201ENST00000581311 263 ntBASIC16.49■□□□□ 0.23
CDC7O00311 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CDC7O00311 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
CDC7O00311 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDC7O00311 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.49■□□□□ 0.23
CDC7O00311 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDC7O00311 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
CDC7O00311 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
CDC7O00311 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDC7O00311 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 AF186996.4-201ENST00000467186 377 ntBASIC16.48■□□□□ 0.23
CDC7O00311 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.48■□□□□ 0.23
CDC7O00311 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.48■□□□□ 0.23
CDC7O00311 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.48■□□□□ 0.23
CDC7O00311 AC105339.3-201ENST00000560043 636 ntBASIC16.48■□□□□ 0.23
CDC7O00311 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.48■□□□□ 0.23
CDC7O00311 AL356488.2-201ENST00000602755 427 ntBASIC16.48■□□□□ 0.23
CDC7O00311 AC008667.4-201ENST00000607370 168 ntBASIC16.48■□□□□ 0.23
CDC7O00311 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC7O00311 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC7O00311 AC131009.4-201ENST00000624048 1740 ntBASIC16.48■□□□□ 0.23
CDC7O00311 AL512652.2-201ENST00000625156 1716 ntBASIC16.48■□□□□ 0.23
CDC7O00311 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
CDC7O00311 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC7O00311 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 GGTLC5P-201ENST00000617623 998 ntBASIC16.47■□□□□ 0.23
CDC7O00311 AL031008.1-201ENST00000619963 541 ntBASIC16.47■□□□□ 0.23
CDC7O00311 MIR1199-201ENST00000621445 119 ntBASIC16.47■□□□□ 0.23
CDC7O00311 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.47■□□□□ 0.23
CDC7O00311 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms