Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM185BP-201ENST00000443595 716 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HCG4B-203ENST00000450128 991 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CXCL1P1-201ENST00000502804 216 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC002347.1-201ENST00000569543 541 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC078925.2-201ENST00000624013 1973 ntBASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC023274.1-201ENST00000418278 595 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 UPF3AP3-201ENST00000420996 769 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 GPX1P2-201ENST00000429271 606 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MIR4492-201ENST00000581627 80 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC131009.4-201ENST00000624048 1740 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NKILA-202ENST00000614771 2598 ntBASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RNF216P1-203ENST00000404404 2427 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RPSAP43-201ENST00000402237 625 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HCG4-201ENST00000418983 998 ntBASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms