Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AC099063.4-201ENST00000641099 1602 ntBASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AC012615.1-201ENST00000565797 1299 ntBASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 MIR3652-201ENST00000579335 131 ntBASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP4B1Q9Y6B7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
AP4B1Q9Y6B7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP4B1Q9Y6B7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 AP000867.3-201ENST00000524675 377 ntBASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4B1Q9Y6B7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP4B1Q9Y6B7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4B1Q9Y6B7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4B1Q9Y6B7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4B1Q9Y6B7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4B1Q9Y6B7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms