Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 VN2R19P-201ENST00000442399 1052 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC107918.2-201ENST00000530817 355 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC145285.3-201ENST00000564603 959 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC091167.2-201ENST00000579581 588 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC005412.3-201ENST00000580309 715 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.89■□□□□ 0.3
PKP3Q9Y446 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PKP3Q9Y446 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
PKP3Q9Y446 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PKP3Q9Y446 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.89■□□□□ 0.3
PKP3Q9Y446 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 LINC00895-201ENST00000629028 1637 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 AL391256.1-201ENST00000443260 1855 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 AL353732.1-201ENST00000569618 1459 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 OR7E47P-204ENST00000575924 449 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 MPDU1-223ENST00000582151 728 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PKP3Q9Y446 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP3Q9Y446 ZNF259P1-201ENST00000407656 1365 ntBASIC16.89■□□□□ 0.29
PKP3Q9Y446 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 NKILA-202ENST00000614771 2598 ntBASIC16.88■□□□□ 0.29
PKP3Q9Y446 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AP001350.2-201ENST00000625104 1094 ntBASIC16.88■□□□□ 0.29
PKP3Q9Y446 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP3Q9Y446 AL645728.1-201ENST00000366221 2101 ntBASIC16.88■□□□□ 0.29
PKP3Q9Y446 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP3Q9Y446 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms