Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 AL356309.3-201ENST00000624132 1934 ntBASIC15.71■□□□□ 0.11
RLIMQ9NVW2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 HYMAI-201ENST00000635591 3347 ntBASIC15.71■□□□□ 0.11
RLIMQ9NVW2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 TSPY19P-201ENST00000418461 509 ntBASIC15.71■□□□□ 0.11
RLIMQ9NVW2 TSPY18P-201ENST00000441642 509 ntBASIC15.71■□□□□ 0.11
RLIMQ9NVW2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 AL121772.3-201ENST00000610840 674 ntBASIC15.71■□□□□ 0.11
RLIMQ9NVW2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RLIMQ9NVW2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RLIMQ9NVW2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RLIMQ9NVW2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AL590787.1-201ENST00000568856 1315 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 RBM17P3-201ENST00000417687 1192 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 DUX4L17-201ENST00000557360 1267 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AC091304.2-201ENST00000564639 760 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 PRELID1P1-202ENST00000567272 903 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 AL022326.1-202ENST00000641533 845 ntBASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RLIMQ9NVW2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AL596257.1-201ENST00000641463 2694 ntBASIC15.69■□□□□ 0.1
RLIMQ9NVW2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AL353135.1-201ENST00000606729 504 ntBASIC15.69■□□□□ 0.1
RLIMQ9NVW2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RLIMQ9NVW2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms