Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 KRT8P49-201ENST00000604166 1432 ntBASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 AC006538.1-201ENST00000567905 1585 ntBASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRCC1Q9NPI7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AC148477.5-201ENST00000625164 1645 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AP002414.1-201ENST00000391405 1147 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 RCN1P2-201ENST00000398357 915 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 LINC00982-205ENST00000420957 435 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AC074051.2-201ENST00000565115 352 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AP002414.4-201ENST00000589764 1148 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 AC026691.1-201ENST00000602502 2017 ntBASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRCC1Q9NPI7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 AL139384.1-201ENST00000612143 3047 ntBASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 AC092329.2-201ENST00000598402 547 ntBASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 AL139011.1-202ENST00000642063 584 ntBASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRCC1Q9NPI7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms