Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 AL512652.2-201ENST00000625156 1716 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.06■□□□□ 0.16
BRF2Q9HAW0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 DOC2GP-204ENST00000639052 2548 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 AL671710.1-201ENST00000610245 2349 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 MRPL20P1-201ENST00000400819 433 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 AC012640.2-201ENST00000561606 901 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 RN7SL510P-201ENST00000581311 263 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 AL691432.3-201ENST00000621860 400 ntBASIC16.05■□□□□ 0.16
BRF2Q9HAW0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.05■□□□□ 0.16
BRF2Q9HAW0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms