Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.7■□□□□ 0.91
UPF2Q9HAU5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UPF2Q9HAU5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.7■□□□□ 0.91
UPF2Q9HAU5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 RNF152P1-201ENST00000397754 604 ntBASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 AC113347.1-201ENST00000413321 391 ntBASIC20.7■□□□□ 0.9
UPF2Q9HAU5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPF2Q9HAU5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 LINC00895-201ENST00000629028 1637 ntBASIC20.69■□□□□ 0.9
UPF2Q9HAU5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 AC092647.4-201ENST00000457211 535 ntBASIC20.69■□□□□ 0.9
UPF2Q9HAU5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 AC009533.2-201ENST00000543664 586 ntBASIC20.69■□□□□ 0.9
UPF2Q9HAU5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 AC090616.6-201ENST00000582640 721 ntBASIC20.69■□□□□ 0.9
UPF2Q9HAU5 AC005363.2-201ENST00000618631 242 ntBASIC20.69■□□□□ 0.9
UPF2Q9HAU5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UPF2Q9HAU5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 HYMAI.1-201ENST00000620949 238 ntBASIC20.68■□□□□ 0.9
UPF2Q9HAU5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPF2Q9HAU5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms