Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DGCR5-201ENST00000399539 862 ntBASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 GIMAP3P-201ENST00000495150 836 ntBASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AC093004.1-201ENST00000508850 424 ntBASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 WASH4P-201ENST00000564273 1246 ntBASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH11XQ9BZA7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AC087499.6-201ENST00000411576 835 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AP006294.1-201ENST00000415407 339 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 HLA-V-201ENST00000429037 534 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AC093724.1-201ENST00000448659 1027 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 INE1-201ENST00000456273 945 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 SPDYE18-201ENST00000510091 1050 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 DOC2GP-202ENST00000514950 1163 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 IGHV3-71-201ENST00000523324 359 ntBASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH11XQ9BZA7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 SPDYE19P-201ENST00000338590 713 ntBASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 SERBP1P3-201ENST00000459980 809 ntBASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH11XQ9BZA7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms