Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 AC027369.6-201ENST00000525520 931 ntBASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC46A2Q9BY10 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC46A2Q9BY10 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC46A2Q9BY10 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC46A2Q9BY10 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC46A2Q9BY10 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AC241585.1-201ENST00000433527 519 ntBASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 LINC02560-201ENST00000596379 459 ntBASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AC007967.4-201ENST00000614700 386 ntBASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 SPTSSB-204ENST00000617024 1292 ntBASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 AL590560.3-201ENST00000623350 461 ntBASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC46A2Q9BY10 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 AL023806.1-201ENST00000603994 1649 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 HLA-H-201ENST00000383620 1096 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 AC004890.2-204ENST00000481968 304 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 TERF1P3-201ENST00000505638 1227 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 AC073592.8-201ENST00000624126 511 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 FZD10-202ENST00000539839 3282 ntBASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC46A2Q9BY10 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms