Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM201B-201ENST00000458407 597 ntBASIC15.88■□□□□ 0.13
NR1H4Q96RI1 HLA-J-202ENST00000469281 1241 ntBASIC15.88■□□□□ 0.13
NR1H4Q96RI1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 AF186192.3-201ENST00000583427 947 ntBASIC15.87■□□□□ 0.13
NR1H4Q96RI1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H4Q96RI1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 FAM207BP-201ENST00000447172 505 ntBASIC15.86■□□□□ 0.13
NR1H4Q96RI1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 AC073195.1-201ENST00000607241 877 ntBASIC15.86■□□□□ 0.13
NR1H4Q96RI1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms