Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.96■□□□□ 0.63
FGD4Q96M96 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.96■□□□□ 0.63
FGD4Q96M96 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.96■□□□□ 0.63
FGD4Q96M96 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.96■□□□□ 0.63
FGD4Q96M96 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.96■□□□□ 0.63
FGD4Q96M96 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.96■□□□□ 0.63
FGD4Q96M96 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.96■□□□□ 0.63
FGD4Q96M96 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 AC106820.2-201ENST00000563775 3264 ntBASIC18.96■□□□□ 0.63
FGD4Q96M96 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
FGD4Q96M96 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.95■□□□□ 0.62
FGD4Q96M96 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.95■□□□□ 0.62
FGD4Q96M96 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 TSSK5P-201ENST00000423978 907 ntBASIC18.95■□□□□ 0.62
FGD4Q96M96 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FGD4Q96M96 AC004890.2-204ENST00000481968 304 ntBASIC18.95■□□□□ 0.62
FGD4Q96M96 IGHV3-42-201ENST00000520410 361 ntBASIC18.95■□□□□ 0.62
FGD4Q96M96 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.95■□□□□ 0.62
FGD4Q96M96 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.95■□□□□ 0.62
FGD4Q96M96 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
FGD4Q96M96 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FGD4Q96M96 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 AL021920.2-201ENST00000624828 1351 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 LINC02012-201ENST00000608206 1725 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 CROCCP2-202ENST00000412962 2773 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
FGD4Q96M96 AC092053.1-201ENST00000605787 1936 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
FGD4Q96M96 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
FGD4Q96M96 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.94■□□□□ 0.62
FGD4Q96M96 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.94■□□□□ 0.62
FGD4Q96M96 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
FGD4Q96M96 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.94■□□□□ 0.62
FGD4Q96M96 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.94■□□□□ 0.62
FGD4Q96M96 RARRES2P9-201ENST00000565168 469 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 LINC02560-201ENST00000596379 459 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 AC021097.1-201ENST00000607902 574 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 AC008761.3-201ENST00000624803 892 ntBASIC18.94■□□□□ 0.62
FGD4Q96M96 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
FGD4Q96M96 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.94■□□□□ 0.62
FGD4Q96M96 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FGD4Q96M96 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 AP3S2-216ENST00000617003 1561 ntBASIC18.93■□□□□ 0.62
FGD4Q96M96 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.93■□□□□ 0.62
FGD4Q96M96 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
FGD4Q96M96 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.93■□□□□ 0.62
FGD4Q96M96 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FGD4Q96M96 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.93■□□□□ 0.62
FGD4Q96M96 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.93■□□□□ 0.62
FGD4Q96M96 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.93■□□□□ 0.62
FGD4Q96M96 FAM207CP-201ENST00000443486 507 ntBASIC18.93■□□□□ 0.62
FGD4Q96M96 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms