Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AL603832.2-201ENST00000566195 2125 ntBASIC16.04■□□□□ 0.16
LRRC58Q96CX6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 GGT3P-204ENST00000453783 1664 ntBASIC16.03■□□□□ 0.16
LRRC58Q96CX6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 AL020989.1-201ENST00000422979 469 ntBASIC16.03■□□□□ 0.16
LRRC58Q96CX6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 AC063952.2-201ENST00000498792 1227 ntBASIC16.03■□□□□ 0.16
LRRC58Q96CX6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.03■□□□□ 0.16
LRRC58Q96CX6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.03■□□□□ 0.16
LRRC58Q96CX6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC58Q96CX6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 AC097637.2-201ENST00000624096 1997 ntBASIC16.02■□□□□ 0.16
LRRC58Q96CX6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC58Q96CX6 AP005901.3-202ENST00000581653 237 ntBASIC16.02■□□□□ 0.16
LRRC58Q96CX6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC58Q96CX6 INTS4P1-201ENST00000438455 1935 ntBASIC16.02■□□□□ 0.15
LRRC58Q96CX6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms