Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 AC007967.3-201ENST00000434308 558 ntBASIC14.62□□□□□ -0.07
CCDC107Q8WV48 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 AC109462.3-201ENST00000573934 613 ntBASIC14.62□□□□□ -0.07
CCDC107Q8WV48 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 AC097374.2-201ENST00000618617 1306 ntBASIC14.62□□□□□ -0.07
CCDC107Q8WV48 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
CCDC107Q8WV48 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AC024909.3-201ENST00000611513 2257 ntBASIC14.61□□□□□ -0.07
CCDC107Q8WV48 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 IGHV3-52-201ENST00000519770 353 ntBASIC14.61□□□□□ -0.07
CCDC107Q8WV48 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 PAUPAR-201ENST00000630360 2965 ntBASIC14.61□□□□□ -0.07
CCDC107Q8WV48 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 AL365203.3-201ENST00000609742 2057 ntBASIC14.61□□□□□ -0.07
CCDC107Q8WV48 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC107Q8WV48 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC107Q8WV48 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms