Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 TUBB7P-202ENST00000428444 1305 ntBASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 NPAP1P7-201ENST00000613027 823 ntBASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC50Q8IVM0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 AC026691.1-201ENST00000602502 2017 ntBASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ABCD1P5-201ENST00000445663 754 ntBASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 KRT18P35-201ENST00000510488 1269 ntBASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 AC138894.3-201ENST00000603787 634 ntBASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 AC093458.2-201ENST00000623150 629 ntBASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC50Q8IVM0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AC004817.3-201ENST00000602957 2129 ntBASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AP002490.2-201ENST00000524791 560 ntBASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 MIR5100-201ENST00000579544 119 ntBASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AL662844.4-201ENST00000606367 2838 ntBASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC50Q8IVM0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms