Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 LINC00982-205ENST00000420957 435 ntBASIC18.31■□□□□ 0.52
CNGA4Q8IV77 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC233702.3-201ENST00000578656 1387 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC002310.6-201ENST00000624451 1377 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 MINOS1P3-201ENST00000457048 203 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC096582.2-201ENST00000510860 516 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 Z69720.1-201ENST00000601483 472 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.3■□□□□ 0.52
CNGA4Q8IV77 AC243591.1-201ENST00000452967 1364 ntBASIC18.3■□□□□ 0.52
CNGA4Q8IV77 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 TERC-201ENST00000602385 541 ntBASIC18.29■□□□□ 0.52
CNGA4Q8IV77 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNGA4Q8IV77 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms