Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 KLF4P1-201ENST00000412782 1185 ntBASIC15.26■□□□□ 0.03
SHFQ7M4L6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 NTF6B-201ENST00000591913 560 ntBASIC15.26■□□□□ 0.03
SHFQ7M4L6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.26■□□□□ 0.03
SHFQ7M4L6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 AD001527.2-201ENST00000622994 785 ntBASIC15.25■□□□□ 0.03
SHFQ7M4L6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
SHFQ7M4L6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHFQ7M4L6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 Z69720.1-201ENST00000601483 472 ntBASIC15.24■□□□□ 0.03
SHFQ7M4L6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.24■□□□□ 0.03
SHFQ7M4L6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHFQ7M4L6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms