Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CASC4Q6P4E1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CASC4Q6P4E1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CASC4Q6P4E1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 AC068587.6-202ENST00000641839 5619 ntBASIC17.2■□□□□ 0.34
CASC4Q6P4E1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 AL732292.2-201ENST00000609649 430 ntBASIC17.2■□□□□ 0.34
CASC4Q6P4E1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CASC4Q6P4E1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 MIR1224-201ENST00000408193 85 ntBASIC17.19■□□□□ 0.34
CASC4Q6P4E1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 UPK3BP1-201ENST00000428678 509 ntBASIC17.19■□□□□ 0.34
CASC4Q6P4E1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.19■□□□□ 0.34
CASC4Q6P4E1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASC4Q6P4E1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms