Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP000344.2-201ENST00000512987 629 ntBASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
CCDC144BQ3MJ40 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 AC092902.6-201ENST00000641783 218 ntBASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144BQ3MJ40 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 AL603756.1-201ENST00000606511 2163 ntBASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 TSEN15P1-201ENST00000423257 515 ntBASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 MIR3197-201ENST00000582241 73 ntBASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 AC093028.1-201ENST00000622998 982 ntBASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144BQ3MJ40 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 AL139400.1-201ENST00000366220 510 ntBASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC144BQ3MJ40 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms