Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NKILA-202ENST00000614771 2598 ntBASIC15.04■□□□□ -0
H3F3AP84243 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.04■□□□□ -0
H3F3AP84243 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 SNX33P1-201ENST00000592116 1762 ntBASIC15.03■□□□□ -0
H3F3AP84243 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.03■□□□□ -0
H3F3AP84243 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.03■□□□□ -0
H3F3AP84243 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.03■□□□□ -0
H3F3AP84243 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 AC012569.1-201ENST00000591191 1524 ntBASIC15.03■□□□□ -0
H3F3AP84243 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 AL603756.1-201ENST00000606511 2163 ntBASIC15.03■□□□□ -0
H3F3AP84243 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.03■□□□□ -0
H3F3AP84243 KRT18P3-201ENST00000451602 1288 ntBASIC15.03■□□□□ -0
H3F3AP84243 AL513480.1-201ENST00000451731 511 ntBASIC15.03■□□□□ -0
H3F3AP84243 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.03■□□□□ -0
H3F3AP84243 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.03■□□□□ -0
H3F3AP84243 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.03■□□□□ -0
H3F3AP84243 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 AP001350.2-201ENST00000625104 1094 ntBASIC15.03■□□□□ -0
H3F3AP84243 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
H3F3AP84243 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.03■□□□□ -0
H3F3AP84243 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3F3AP84243 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.03■□□□□ -0
H3F3AP84243 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.02■□□□□ -0
H3F3AP84243 AC011676.5-201ENST00000624864 2660 ntBASIC15.02■□□□□ -0
H3F3AP84243 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
H3F3AP84243 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.02■□□□□ -0
H3F3AP84243 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.02■□□□□ -0
H3F3AP84243 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.02■□□□□ -0
H3F3AP84243 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.02■□□□□ -0
H3F3AP84243 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.02■□□□□ -0
H3F3AP84243 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3F3AP84243 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.02■□□□□ -0
H3F3AP84243 MED15P5-201ENST00000423150 992 ntBASIC15.02■□□□□ -0
H3F3AP84243 AP000347.1-202ENST00000435868 847 ntBASIC15.02■□□□□ -0
H3F3AP84243 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.02■□□□□ -0
H3F3AP84243 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.02■□□□□ -0
H3F3AP84243 RNA5SP416-201ENST00000516838 111 ntBASIC15.02■□□□□ -0
H3F3AP84243 KRT18P58-201ENST00000527480 1120 ntBASIC15.02■□□□□ -0
H3F3AP84243 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
H3F3AP84243 AL031432.2-201ENST00000566714 459 ntBASIC15.02■□□□□ -0
H3F3AP84243 AL928711.1-201ENST00000570165 459 ntBASIC15.02■□□□□ -0
H3F3AP84243 CYP2A7P1-201ENST00000595391 815 ntBASIC15.02■□□□□ -0
H3F3AP84243 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.02■□□□□ -0
H3F3AP84243 AL671883.3-201ENST00000603274 991 ntBASIC15.02■□□□□ -0
H3F3AP84243 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.02■□□□□ -0
H3F3AP84243 AC007064.4-201ENST00000637740 555 ntBASIC15.02■□□□□ -0
H3F3AP84243 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H3F3AP84243 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H3F3AP84243 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
H3F3AP84243 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
H3F3AP84243 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H3F3AP84243 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.02□□□□□ -0.01
H3F3AP84243 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.02□□□□□ -0.01
H3F3AP84243 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.02□□□□□ -0.01
H3F3AP84243 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms