Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D3P61077 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.03□□□□□ -0.48
UBE2D3P61077 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.03□□□□□ -0.48
UBE2D3P61077 AL590326.2-201ENST00000625139 305 ntBASIC12.03□□□□□ -0.48
UBE2D3P61077 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D3P61077 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D3P61077 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D3P61077 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D3P61077 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
UBE2D3P61077 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D3P61077 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
UBE2D3P61077 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D3P61077 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
UBE2D3P61077 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D3P61077 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.02□□□□□ -0.48
UBE2D3P61077 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
UBE2D3P61077 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.02□□□□□ -0.48
UBE2D3P61077 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
UBE2D3P61077 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D3P61077 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
UBE2D3P61077 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D3P61077 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 SPDYE21P-201ENST00000413323 827 ntBASIC12.02□□□□□ -0.49
UBE2D3P61077 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2D3P61077 AC104819.1-201ENST00000504587 486 ntBASIC12.02□□□□□ -0.49
UBE2D3P61077 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 AC074051.2-201ENST00000565115 352 ntBASIC12.02□□□□□ -0.49
UBE2D3P61077 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.02□□□□□ -0.49
UBE2D3P61077 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.02□□□□□ -0.49
UBE2D3P61077 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 AP000867.4-201ENST00000641616 219 ntBASIC12.02□□□□□ -0.49
UBE2D3P61077 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 PAUPAR-201ENST00000630360 2965 ntBASIC12.02□□□□□ -0.49
UBE2D3P61077 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2D3P61077 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
UBE2D3P61077 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2D3P61077 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D3P61077 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D3P61077 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D3P61077 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2D3P61077 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D3P61077 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D3P61077 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UBE2D3P61077 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D3P61077 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2D3P61077 AC148477.5-201ENST00000625164 1645 ntBASIC12.01□□□□□ -0.49
UBE2D3P61077 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2D3P61077 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2D3P61077 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms