Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 FSCN1P1-201ENST00000568912 1481 ntBASIC13.13□□□□□ -0.31
ERVFC1-1P60608 KRT8P47-201ENST00000604727 1398 ntBASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CD177P1-201ENST00000606252 935 ntBASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ERVFC1-1P60608 AL137784.3-201ENST00000623858 2288 ntBASIC13.13□□□□□ -0.31
ERVFC1-1P60608 SNX18-202ENST00000343017 3140 ntBASIC13.13□□□□□ -0.31
ERVFC1-1P60608 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 AC211429.1-201ENST00000415277 523 ntBASIC13.12□□□□□ -0.31
ERVFC1-1P60608 MFAP1P1-201ENST00000442257 1255 ntBASIC13.12□□□□□ -0.31
ERVFC1-1P60608 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 TNRC18P2-201ENST00000417666 2714 ntBASIC13.12□□□□□ -0.31
ERVFC1-1P60608 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms