Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN20P56880 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN20P56880 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 ZNF259P1-201ENST00000407656 1365 ntBASIC15.47■□□□□ 0.07
CLDN20P56880 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN20P56880 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 MIR574-201ENST00000385209 96 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN20P56880 AP002414.1-201ENST00000391405 1147 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 SLC25A1P3-201ENST00000395415 828 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN20P56880 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN20P56880 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN20P56880 AC108073.2-201ENST00000464002 357 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 AL671883.3-201ENST00000603274 991 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 AC008667.4-201ENST00000607370 168 ntBASIC15.46■□□□□ 0.07
CLDN20P56880 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN20P56880 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN20P56880 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLDN20P56880 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN20P56880 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.46■□□□□ 0.06
CLDN20P56880 PI4KAP1-204ENST00000612579 1703 ntBASIC15.46■□□□□ 0.06
CLDN20P56880 AC093525.9-201ENST00000624961 1746 ntBASIC15.46■□□□□ 0.06
CLDN20P56880 CROCCP1-201ENST00000426910 5675 ntBASIC15.46■□□□□ 0.06
CLDN20P56880 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.45■□□□□ 0.06
CLDN20P56880 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 AC092850.2-201ENST00000623821 2697 ntBASIC15.45■□□□□ 0.06
CLDN20P56880 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDN20P56880 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.45■□□□□ 0.06
CLDN20P56880 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 IGHV3-65-201ENST00000523210 341 ntBASIC15.45■□□□□ 0.06
CLDN20P56880 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
CLDN20P56880 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.45■□□□□ 0.06
CLDN20P56880 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN20P56880 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLDN20P56880 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN20P56880 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN20P56880 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN20P56880 AC116353.5-201ENST00000638148 1699 ntBASIC15.44■□□□□ 0.06
CLDN20P56880 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN20P56880 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN20P56880 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN20P56880 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms