Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 AC098831.1-202ENST00000438821 336 ntBASIC14.99□□□□□ -0.01
CSNK1A1P48729 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 AC108073.2-201ENST00000464002 357 ntBASIC14.99□□□□□ -0.01
CSNK1A1P48729 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 LINC00895-201ENST00000629028 1637 ntBASIC14.99□□□□□ -0.01
CSNK1A1P48729 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1A1P48729 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1A1P48729 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 AL645728.1-201ENST00000366221 2101 ntBASIC14.98□□□□□ -0.01
CSNK1A1P48729 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 AGGF1P2-201ENST00000426656 2106 ntBASIC14.98□□□□□ -0.01
CSNK1A1P48729 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 REXO1L3P-201ENST00000622202 1288 ntBASIC14.98□□□□□ -0.01
CSNK1A1P48729 AC116407.3-201ENST00000623905 1129 ntBASIC14.98□□□□□ -0.01
CSNK1A1P48729 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1A1P48729 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1A1P48729 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 AC129492.6-201ENST00000611383 1305 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms