Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 AC124067.4-201ENST00000519691 2379 ntBASIC17.74■□□□□ 0.43
KRT3P12035 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT3P12035 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 AC129492.6-201ENST00000611383 1305 ntBASIC17.73■□□□□ 0.43
KRT3P12035 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT3P12035 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT3P12035 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
KRT3P12035 AC093909.1-201ENST00000504731 1122 ntBASIC17.73■□□□□ 0.43
KRT3P12035 AL662844.1-201ENST00000546340 181 ntBASIC17.73■□□□□ 0.43
KRT3P12035 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT3P12035 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.73■□□□□ 0.43
KRT3P12035 MIR7706-201ENST00000613747 67 ntBASIC17.73■□□□□ 0.43
KRT3P12035 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT3P12035 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KRT3P12035 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT3P12035 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
KRT3P12035 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KRT3P12035 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT3P12035 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KRT3P12035 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
KRT3P12035 RNA5SP419-201ENST00000515908 135 ntBASIC17.72■□□□□ 0.43
KRT3P12035 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT3P12035 AC107918.2-201ENST00000530817 355 ntBASIC17.72■□□□□ 0.43
KRT3P12035 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.72■□□□□ 0.43
KRT3P12035 AP001005.1-201ENST00000571755 1248 ntBASIC17.72■□□□□ 0.43
KRT3P12035 AC091167.2-201ENST00000579581 588 ntBASIC17.72■□□□□ 0.43
KRT3P12035 SLC25A6P4-201ENST00000586535 553 ntBASIC17.72■□□□□ 0.43
KRT3P12035 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT3P12035 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
KRT3P12035 AC004790.2-201ENST00000623588 572 ntBASIC17.72■□□□□ 0.43
KRT3P12035 AC116407.3-201ENST00000623905 1129 ntBASIC17.72■□□□□ 0.43
KRT3P12035 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT3P12035 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT3P12035 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT3P12035 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT3P12035 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT3P12035 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 MRPL20P1-201ENST00000400819 433 ntBASIC17.71■□□□□ 0.43
KRT3P12035 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT3P12035 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 AC108073.2-201ENST00000464002 357 ntBASIC17.71■□□□□ 0.43
KRT3P12035 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT3P12035 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 MIR4492-201ENST00000581627 80 ntBASIC17.71■□□□□ 0.43
KRT3P12035 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT3P12035 AL139011.1-202ENST00000642063 584 ntBASIC17.71■□□□□ 0.43
KRT3P12035 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT3P12035 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms