Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 AC092919.2-201ENST00000623631 1645 ntBASIC16.88■□□□□ 0.29
MMP2P08253 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
MMP2P08253 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.88■□□□□ 0.29
MMP2P08253 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MMP2P08253 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
MMP2P08253 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MMP2P08253 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.88■□□□□ 0.29
MMP2P08253 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 KRT18P58-201ENST00000527480 1120 ntBASIC16.88■□□□□ 0.29
MMP2P08253 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.88■□□□□ 0.29
MMP2P08253 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.88■□□□□ 0.29
MMP2P08253 PDPK2P-202ENST00000562415 1191 ntBASIC16.88■□□□□ 0.29
MMP2P08253 AL031055.1-201ENST00000606362 631 ntBASIC16.88■□□□□ 0.29
MMP2P08253 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.88■□□□□ 0.29
MMP2P08253 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MMP2P08253 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MMP2P08253 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MMP2P08253 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
MMP2P08253 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
MMP2P08253 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP2P08253 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MMP2P08253 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MMP2P08253 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.87■□□□□ 0.29
MMP2P08253 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP2P08253 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP2P08253 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MMP2P08253 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 AC124067.4-201ENST00000519691 2379 ntBASIC16.86■□□□□ 0.29
MMP2P08253 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 AC023274.1-201ENST00000418278 595 ntBASIC16.86■□□□□ 0.29
MMP2P08253 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 AC140658.5-201ENST00000438532 169 ntBASIC16.86■□□□□ 0.29
MMP2P08253 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.86■□□□□ 0.29
MMP2P08253 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.86■□□□□ 0.29
MMP2P08253 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 MIR3909-201ENST00000579518 119 ntBASIC16.86■□□□□ 0.29
MMP2P08253 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms