Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTSBP07858 WASH6P-202ENST00000359512 1437 ntBASIC15.87■□□□□ 0.13
CTSBP07858 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.87■□□□□ 0.13
CTSBP07858 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTSBP07858 AC106886.4-201ENST00000623557 2502 ntBASIC15.87■□□□□ 0.13
CTSBP07858 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTSBP07858 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.87■□□□□ 0.13
CTSBP07858 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 PMS2P4-201ENST00000412466 1052 ntBASIC15.87■□□□□ 0.13
CTSBP07858 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.87■□□□□ 0.13
CTSBP07858 TSEN15P1-201ENST00000423257 515 ntBASIC15.87■□□□□ 0.13
CTSBP07858 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.87■□□□□ 0.13
CTSBP07858 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 FAM86C2P-203ENST00000528684 1004 ntBASIC15.87■□□□□ 0.13
CTSBP07858 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.87■□□□□ 0.13
CTSBP07858 AL161645.1-201ENST00000622716 1255 ntBASIC15.87■□□□□ 0.13
CTSBP07858 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.87■□□□□ 0.13
CTSBP07858 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.87■□□□□ 0.13
CTSBP07858 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CTSBP07858 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 AC092171.3-201ENST00000610122 2651 ntBASIC15.87■□□□□ 0.13
CTSBP07858 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSBP07858 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSBP07858 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
CTSBP07858 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 AL512652.2-201ENST00000625156 1716 ntBASIC15.86■□□□□ 0.13
CTSBP07858 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.86■□□□□ 0.13
CTSBP07858 AC005237.2-201ENST00000434368 219 ntBASIC15.86■□□□□ 0.13
CTSBP07858 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.86■□□□□ 0.13
CTSBP07858 MIR3909-201ENST00000579518 119 ntBASIC15.86■□□□□ 0.13
CTSBP07858 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
CTSBP07858 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.86■□□□□ 0.13
CTSBP07858 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
CTSBP07858 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CTSBP07858 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSBP07858 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSBP07858 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSBP07858 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CTSBP07858 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.85■□□□□ 0.13
CTSBP07858 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 GPS2P2-201ENST00000430745 888 ntBASIC15.85■□□□□ 0.13
CTSBP07858 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.85■□□□□ 0.13
CTSBP07858 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 AC023141.5-201ENST00000458585 616 ntBASIC15.85■□□□□ 0.13
CTSBP07858 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms