Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 AC097637.2-201ENST00000624096 1997 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 MINOS1P3-201ENST00000457048 203 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 AC091607.1-201ENST00000490318 1060 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGN1P05114 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGN1P05114 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGN1P05114 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HMGN1P05114 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 NTF6B-201ENST00000591913 560 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 Z69720.1-201ENST00000601483 472 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 AC013467.2-201ENST00000605472 835 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 AC007950.2-201ENST00000615045 2347 ntBASIC15.28■□□□□ 0.04
HMGN1P05114 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGN1P05114 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGN1P05114 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGN1P05114 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HMGN1P05114 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMGN1P05114 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMGN1P05114 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGN1P05114 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGN1P05114 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGN1P05114 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGN1P05114 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMGN1P05114 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGN1P05114 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGN1P05114 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGN1P05114 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGN1P05114 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HMGN1P05114 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGN1P05114 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGN1P05114 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HMGN1P05114 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGN1P05114 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
HMGN1P05114 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
HMGN1P05114 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGN1P05114 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.26■□□□□ 0.03
HMGN1P05114 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms