Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.95■□□□□ 0.14
CLPTM1O96005 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.95■□□□□ 0.14
CLPTM1O96005 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 AC112497.1-201ENST00000624824 639 ntBASIC15.95■□□□□ 0.14
CLPTM1O96005 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 CICP13-201ENST00000422015 2789 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 ALOX12P2-203ENST00000570921 1945 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.94■□□□□ 0.14
CLPTM1O96005 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CLPTM1O96005 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 AL359075.1-203ENST00000462729 1002 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 AC063952.2-201ENST00000498792 1227 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 AC022616.7-201ENST00000525383 220 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 NTF6B-201ENST00000591913 560 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CLPTM1O96005 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 AC013268.4-201ENST00000637413 2228 ntBASIC15.94■□□□□ 0.14
CLPTM1O96005 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPTM1O96005 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPTM1O96005 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPTM1O96005 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.93■□□□□ 0.14
CLPTM1O96005 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.93■□□□□ 0.14
CLPTM1O96005 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CLPTM1O96005 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.93■□□□□ 0.14
CLPTM1O96005 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CLPTM1O96005 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.93■□□□□ 0.14
CLPTM1O96005 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 AC092647.4-201ENST00000457211 535 ntBASIC15.93■□□□□ 0.14
CLPTM1O96005 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.93■□□□□ 0.14
CLPTM1O96005 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.93■□□□□ 0.14
CLPTM1O96005 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 AC124947.2-201ENST00000547118 1133 ntBASIC15.93■□□□□ 0.14
CLPTM1O96005 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLPTM1O96005 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.93■□□□□ 0.14
CLPTM1O96005 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
CLPTM1O96005 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms