Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDKL5O76039 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDKL5O76039 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.55■□□□□ 0.72
CDKL5O76039 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL5O76039 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDKL5O76039 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL5O76039 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 RNA5SP419-201ENST00000515908 135 ntBASIC19.55■□□□□ 0.72
CDKL5O76039 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL5O76039 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL5O76039 AC116407.3-201ENST00000623905 1129 ntBASIC19.55■□□□□ 0.72
CDKL5O76039 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL5O76039 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 AC124067.4-201ENST00000519691 2379 ntBASIC19.55■□□□□ 0.72
CDKL5O76039 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL5O76039 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDKL5O76039 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL5O76039 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDKL5O76039 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL5O76039 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 KRT8P39-201ENST00000396270 1433 ntBASIC19.54■□□□□ 0.72
CDKL5O76039 UBALD1-205ENST00000590891 2641 ntBASIC19.54■□□□□ 0.72
CDKL5O76039 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL5O76039 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.54■□□□□ 0.72
CDKL5O76039 OR7E47P-204ENST00000575924 449 ntBASIC19.54■□□□□ 0.72
CDKL5O76039 MIR4751-201ENST00000578027 74 ntBASIC19.54■□□□□ 0.72
CDKL5O76039 CYP2A7P1-201ENST00000595391 815 ntBASIC19.54■□□□□ 0.72
CDKL5O76039 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL5O76039 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDKL5O76039 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL5O76039 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL5O76039 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.54■□□□□ 0.72
CDKL5O76039 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL5O76039 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL5O76039 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.53■□□□□ 0.72
CDKL5O76039 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.53■□□□□ 0.72
CDKL5O76039 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDKL5O76039 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDKL5O76039 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.53■□□□□ 0.72
CDKL5O76039 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CDKL5O76039 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.53■□□□□ 0.72
CDKL5O76039 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL5O76039 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL5O76039 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL5O76039 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL5O76039 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDKL5O76039 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL5O76039 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 SNX33P1-201ENST00000592116 1762 ntBASIC19.52■□□□□ 0.72
CDKL5O76039 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms