Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF4O60810 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF4O60810 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 AC018695.7-201ENST00000624587 2492 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 AL031731.1-201ENST00000642131 2094 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 AL662844.1-201ENST00000546340 181 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 AC010654.1-201ENST00000615722 808 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF4O60810 PKD1P1-201ENST00000458669 6805 ntBASIC16.16■□□□□ 0.18
PRAMEF4O60810 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF4O60810 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 GGT3P-204ENST00000453783 1664 ntBASIC16.15■□□□□ 0.18
PRAMEF4O60810 ME2P1-201ENST00000426028 1970 ntBASIC16.15■□□□□ 0.18
PRAMEF4O60810 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 PRSS29P-201ENST00000440800 595 ntBASIC16.15■□□□□ 0.18
PRAMEF4O60810 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 AC005412.3-201ENST00000580309 715 ntBASIC16.15■□□□□ 0.18
PRAMEF4O60810 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.15■□□□□ 0.18
PRAMEF4O60810 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF4O60810 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF4O60810 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.18
PRAMEF4O60810 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.14■□□□□ 0.18
PRAMEF4O60810 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
PRAMEF4O60810 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.18
PRAMEF4O60810 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF4O60810 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.14■□□□□ 0.17
PRAMEF4O60810 VN2R19P-201ENST00000442399 1052 ntBASIC16.14■□□□□ 0.17
PRAMEF4O60810 HCG4B-203ENST00000450128 991 ntBASIC16.14■□□□□ 0.17
PRAMEF4O60810 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms