Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASQ2O14958 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASQ2O14958 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CASQ2O14958 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.02■□□□□ 0.16
CASQ2O14958 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CASQ2O14958 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CASQ2O14958 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 AC096633.1-201ENST00000422446 749 ntBASIC16.02■□□□□ 0.16
CASQ2O14958 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 AC026366.1-201ENST00000488803 879 ntBASIC16.02■□□□□ 0.16
CASQ2O14958 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.02■□□□□ 0.16
CASQ2O14958 AC009154.2-201ENST00000621177 724 ntBASIC16.02■□□□□ 0.16
CASQ2O14958 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CASQ2O14958 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASQ2O14958 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CASQ2O14958 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CASQ2O14958 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.02■□□□□ 0.15
CASQ2O14958 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASQ2O14958 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.02■□□□□ 0.15
CASQ2O14958 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CASQ2O14958 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CASQ2O14958 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.01■□□□□ 0.15
CASQ2O14958 AC026271.2-201ENST00000428091 497 ntBASIC16.01■□□□□ 0.15
CASQ2O14958 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.01■□□□□ 0.15
CASQ2O14958 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.01■□□□□ 0.15
CASQ2O14958 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.01■□□□□ 0.15
CASQ2O14958 AL353719.1-201ENST00000566847 864 ntBASIC16.01■□□□□ 0.15
CASQ2O14958 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.01■□□□□ 0.15
CASQ2O14958 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.01■□□□□ 0.15
CASQ2O14958 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CASQ2O14958 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.01■□□□□ 0.15
CASQ2O14958 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CASQ2O14958 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.01■□□□□ 0.15
CASQ2O14958 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASQ2O14958 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CASQ2O14958 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16■□□□□ 0.15
CASQ2O14958 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CASQ2O14958 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16■□□□□ 0.15
CASQ2O14958 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CASQ2O14958 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CASQ2O14958 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASQ2O14958 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16■□□□□ 0.15
CASQ2O14958 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms