Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 AL662890.1-201ENST00000396818 632 ntBASIC17.67■□□□□ 0.42
SOX1O00570 RPL17P11-201ENST00000417593 544 ntBASIC17.67■□□□□ 0.42
SOX1O00570 ACTG1P3-201ENST00000431775 1114 ntBASIC17.67■□□□□ 0.42
SOX1O00570 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 AC104306.2-201ENST00000451877 341 ntBASIC17.67■□□□□ 0.42
SOX1O00570 AKR7A2P1-201ENST00000460134 915 ntBASIC17.67■□□□□ 0.42
SOX1O00570 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SOX1O00570 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.67■□□□□ 0.42
SOX1O00570 AP001350.2-201ENST00000625104 1094 ntBASIC17.67■□□□□ 0.42
SOX1O00570 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SOX1O00570 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SOX1O00570 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.67■□□□□ 0.42
SOX1O00570 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.66■□□□□ 0.42
SOX1O00570 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.66■□□□□ 0.42
SOX1O00570 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SOX1O00570 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SOX1O00570 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 AC026954.1-201ENST00000429771 1293 ntBASIC17.66■□□□□ 0.42
SOX1O00570 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SOX1O00570 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 AC092337.1-201ENST00000568699 1129 ntBASIC17.66■□□□□ 0.42
SOX1O00570 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.66■□□□□ 0.42
SOX1O00570 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.66■□□□□ 0.42
SOX1O00570 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SOX1O00570 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SOX1O00570 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SOX1O00570 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.66■□□□□ 0.42
SOX1O00570 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
SOX1O00570 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SOX1O00570 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SOX1O00570 KRT8P12-202ENST00000472924 1397 ntBASIC17.66■□□□□ 0.42
SOX1O00570 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.65■□□□□ 0.42
SOX1O00570 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.65■□□□□ 0.42
SOX1O00570 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SOX1O00570 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.65■□□□□ 0.42
SOX1O00570 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SOX1O00570 AC073439.1-201ENST00000624121 1774 ntBASIC17.65■□□□□ 0.42
SOX1O00570 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SOX1O00570 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 AL607033.1-201ENST00000623900 1599 ntBASIC17.65■□□□□ 0.42
SOX1O00570 TOP3BP1-201ENST00000420768 1380 ntBASIC17.65■□□□□ 0.42
SOX1O00570 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.65■□□□□ 0.42
SOX1O00570 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SOX1O00570 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SOX1O00570 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.64■□□□□ 0.42
SOX1O00570 KRT8P22-201ENST00000562317 1415 ntBASIC17.64■□□□□ 0.42
SOX1O00570 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SOX1O00570 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SOX1O00570 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms