Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDLIM1O00151 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.08■□□□□ 0.16
PDLIM1O00151 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 AC112698.1-201ENST00000510299 916 ntBASIC16.08■□□□□ 0.16
PDLIM1O00151 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.08■□□□□ 0.16
PDLIM1O00151 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.08■□□□□ 0.16
PDLIM1O00151 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.08■□□□□ 0.16
PDLIM1O00151 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.08■□□□□ 0.16
PDLIM1O00151 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PDLIM1O00151 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.08■□□□□ 0.16
PDLIM1O00151 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PDLIM1O00151 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PDLIM1O00151 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.08■□□□□ 0.16
PDLIM1O00151 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM1O00151 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM1O00151 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM1O00151 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM1O00151 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDLIM1O00151 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM1O00151 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM1O00151 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 KRT18P48-201ENST00000434763 852 ntBASIC16.06■□□□□ 0.16
PDLIM1O00151 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.06■□□□□ 0.16
PDLIM1O00151 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms