Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 SNX33P1-201ENST00000592116 1762 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TREML5P-201ENST00000421694 576 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 AC097493.3-201ENST00000509725 367 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 MIR4745-201ENST00000577608 62 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 SPTSSB-204ENST00000617024 1292 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 PP12613-201ENST00000424958 2230 ntBASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.39■□□□□ 0.21
HS3ST3A1Q9Y663 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 PCDHB17P-201ENST00000539533 2393 ntBASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AC141586.5-201ENST00000624546 2050 ntBASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.38■□□□□ 0.21
HS3ST3A1Q9Y663 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 AC073439.1-201ENST00000624121 1774 ntBASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 AC098859.1-201ENST00000502915 1238 ntBASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.37■□□□□ 0.21
HS3ST3A1Q9Y663 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms