Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.93■□□□□ 0.3
PKP3Q9Y446 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP3Q9Y446 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 CRYGEP-201ENST00000412192 528 ntBASIC16.92■□□□□ 0.3
PKP3Q9Y446 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP3Q9Y446 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP3Q9Y446 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 RPL13AP23-201ENST00000480739 586 ntBASIC16.91■□□□□ 0.3
PKP3Q9Y446 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 AC120114.3-201ENST00000611923 658 ntBASIC16.91■□□□□ 0.3
PKP3Q9Y446 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 BX640515.1-201ENST00000617215 977 ntBASIC16.91■□□□□ 0.3
PKP3Q9Y446 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 TNRC18P3-201ENST00000441896 2691 ntBASIC16.91■□□□□ 0.3
PKP3Q9Y446 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP3Q9Y446 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PKP3Q9Y446 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 AC104109.2-201ENST00000602919 1418 ntBASIC16.9■□□□□ 0.3
PKP3Q9Y446 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP3Q9Y446 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP3Q9Y446 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms