Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 AL021920.2-201ENST00000624828 1351 ntBASIC13.71□□□□□ -0.21
RAB40CQ96S21 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 MIR662-201ENST00000384847 95 ntBASIC13.71□□□□□ -0.21
RAB40CQ96S21 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 AC113347.1-201ENST00000413321 391 ntBASIC13.71□□□□□ -0.21
RAB40CQ96S21 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40CQ96S21 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40CQ96S21 AC126755.1-201ENST00000525846 6405 ntBASIC13.71□□□□□ -0.21
RAB40CQ96S21 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40CQ96S21 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40CQ96S21 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40CQ96S21 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40CQ96S21 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RAB40CQ96S21 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 FAM220CP-201ENST00000395253 831 ntBASIC13.7□□□□□ -0.22
RAB40CQ96S21 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40CQ96S21 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB40CQ96S21 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms