Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC44A1Q8WWI5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AC087388.1-201ENST00000571370 1112 ntBASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 AL671710.1-201ENST00000610245 2349 ntBASIC16.9■□□□□ 0.3
SLC44A1Q8WWI5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC44A1Q8WWI5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SLC44A1Q8WWI5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SLC44A1Q8WWI5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC44A1Q8WWI5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 LINC00265-3P-201ENST00000447588 903 ntBASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 TOP3BP1-201ENST00000420768 1380 ntBASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SLC44A1Q8WWI5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms