Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PRYP6-201ENST00000514804 343 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 RN7SL828P-201ENST00000607615 303 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TPRX2P-201ENST00000535362 881 ntBASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.97□□□□□ -0.17
CSMD2Q7Z408 MSTO2P-201ENST00000314835 1709 ntBASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 FO681548.1-201ENST00000455617 1132 ntBASIC13.97□□□□□ -0.17
CSMD2Q7Z408 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD2Q7Z408 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AC025048.3-201ENST00000590609 569 ntBASIC13.96□□□□□ -0.17
CSMD2Q7Z408 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AC104457.1-201ENST00000401024 814 ntBASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AC007551.1-201ENST00000457394 519 ntBASIC13.96□□□□□ -0.17
CSMD2Q7Z408 ACTG1P17-201ENST00000558391 1119 ntBASIC13.96□□□□□ -0.17
CSMD2Q7Z408 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD2Q7Z408 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CSMD2Q7Z408 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms