Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 AC091167.2-201ENST00000579581 588 ntBASIC18.98■□□□□ 0.63
SHC4Q6S5L8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 LINC01711-201ENST00000598340 967 ntBASIC18.98■□□□□ 0.63
SHC4Q6S5L8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
SHC4Q6S5L8 MTHFR-217ENST00000641820 1569 ntBASIC18.98■□□□□ 0.63
SHC4Q6S5L8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 CICP6-201ENST00000457191 2729 ntBASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 RNPS1P1-201ENST00000507437 918 ntBASIC18.97■□□□□ 0.63
SHC4Q6S5L8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 OR7E14P-202ENST00000530490 1290 ntBASIC18.97■□□□□ 0.63
SHC4Q6S5L8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC4Q6S5L8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 EMBP1-201ENST00000458200 901 ntBASIC18.96■□□□□ 0.63
SHC4Q6S5L8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.96■□□□□ 0.63
SHC4Q6S5L8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 AC012640.2-201ENST00000561606 901 ntBASIC18.96■□□□□ 0.63
SHC4Q6S5L8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC4Q6S5L8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms