Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AC136632.2-201ENST00000512891 861 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AC107918.2-201ENST00000530817 355 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 MIR4492-201ENST00000581627 80 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AC008735.5-201ENST00000623544 497 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AP002414.3-201ENST00000589352 1468 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AC006538.1-201ENST00000567905 1585 ntBASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AL662844.4-201ENST00000606367 2838 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 KRT18P67-201ENST00000432816 1264 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 MPDU1-223ENST00000582151 728 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AC104692.2-201ENST00000603054 253 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AL031008.1-201ENST00000619963 541 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF549Q6P9A3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.71■□□□□ 0.26
ZNF549Q6P9A3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 AC008667.4-201ENST00000607370 168 ntBASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF549Q6P9A3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms