Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RFX4Q33E94 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.72■□□□□ 0.11
RFX4Q33E94 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.72■□□□□ 0.11
RFX4Q33E94 AC211429.1-201ENST00000415277 523 ntBASIC15.72■□□□□ 0.11
RFX4Q33E94 RN7SL606P-201ENST00000472779 293 ntBASIC15.72■□□□□ 0.11
RFX4Q33E94 AC122714.2-201ENST00000502787 707 ntBASIC15.72■□□□□ 0.11
RFX4Q33E94 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.72■□□□□ 0.11
RFX4Q33E94 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.72■□□□□ 0.11
RFX4Q33E94 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.72■□□□□ 0.11
RFX4Q33E94 AL353801.3-201ENST00000609898 542 ntBASIC15.72■□□□□ 0.11
RFX4Q33E94 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.72■□□□□ 0.11
RFX4Q33E94 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RFX4Q33E94 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFX4Q33E94 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.72■□□□□ 0.11
RFX4Q33E94 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
RFX4Q33E94 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.71■□□□□ 0.11
RFX4Q33E94 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RFX4Q33E94 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
RFX4Q33E94 AC103564.2-201ENST00000432853 1299 ntBASIC15.71■□□□□ 0.11
RFX4Q33E94 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.71■□□□□ 0.11
RFX4Q33E94 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.71■□□□□ 0.11
RFX4Q33E94 AC083849.1-201ENST00000615227 514 ntBASIC15.71■□□□□ 0.11
RFX4Q33E94 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.71■□□□□ 0.11
RFX4Q33E94 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.71■□□□□ 0.11
RFX4Q33E94 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFX4Q33E94 AC126177.1-201ENST00000547829 2218 ntBASIC15.71■□□□□ 0.1
RFX4Q33E94 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.71■□□□□ 0.1
RFX4Q33E94 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFX4Q33E94 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFX4Q33E94 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.71■□□□□ 0.1
RFX4Q33E94 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 AL049757.1-201ENST00000616842 1596 ntBASIC15.7■□□□□ 0.1
RFX4Q33E94 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFX4Q33E94 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.7■□□□□ 0.1
RFX4Q33E94 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFX4Q33E94 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.7■□□□□ 0.1
RFX4Q33E94 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.7■□□□□ 0.1
RFX4Q33E94 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.7■□□□□ 0.1
RFX4Q33E94 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFX4Q33E94 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFX4Q33E94 AC104076.2-201ENST00000448912 469 ntBASIC15.7■□□□□ 0.1
RFX4Q33E94 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.7■□□□□ 0.1
RFX4Q33E94 AC063952.2-201ENST00000498792 1227 ntBASIC15.7■□□□□ 0.1
RFX4Q33E94 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms