Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 DOC2GP-204ENST00000639052 2548 ntBASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO1Q2MKA7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FDX1P1-201ENST00000449115 551 ntBASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 HCG4B-203ENST00000450128 991 ntBASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 CXCL1P1-201ENST00000502804 216 ntBASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 MIR4515-201ENST00000584082 81 ntBASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 CYP2T1P-202ENST00000641596 2535 ntBASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
RSPO1Q2MKA7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 AC012569.1-201ENST00000591191 1524 ntBASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RSPO1Q2MKA7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RSPO1Q2MKA7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO1Q2MKA7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms