Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MYO19-215ENST00000616159 963 ntTSL 217.26■□□□□ 0.352e-8■□□□□ 9
NCBP2P52298 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.17■□□□□ 0.342e-8■□□□□ 9
NCBP2P52298 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.97□□□□□ -0.172e-8■□□□□ 9
NCBP2P52298 MYO19-204ENST00000610992 5743 ntTSL 213.42□□□□□ -0.262e-8■□□□□ 9
NCBP2P52298 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.04□□□□□ -0.482e-8■□□□□ 9
NCBP2P52298 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.572e-8■□□□□ 9
NCBP2P52298 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.592e-8■□□□□ 9
NCBP2P52298 MYO19-226ENST00000621550 4299 ntTSL 510.56□□□□□ -0.722e-8■□□□□ 9
NCBP2P52298 MYO19-216ENST00000616207 786 ntTSL 59.57□□□□□ -0.882e-8■□□□□ 9
NCBP2P52298 MYO19-201ENST00000610496 578 ntTSL 38.57□□□□□ -1.042e-8■□□□□ 9
NCBP2P52298 MYO19-211ENST00000613551 556 ntTSL 47.9□□□□□ -1.142e-8■□□□□ 9
NCBP2P52298 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.62e-8■□□□□ 9
NCBP2P52298 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.25e-6■□□□□ 9
NCBP2P52298 MOGS-208ENST00000486036 811 ntTSL 220.45■□□□□ 0.861e-9■□□□□ 9
NCBP2P52298 COCH-208ENST00000555117 619 ntTSL 220.27■□□□□ 0.845e-6■□□□□ 9
NCBP2P52298 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.13■□□□□ 0.811e-9■□□□□ 9
NCBP2P52298 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.765e-6■□□□□ 9
NCBP2P52298 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.745e-6■□□□□ 9
NCBP2P52298 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.695e-6■□□□□ 9
NCBP2P52298 TMEM189-204ENST00000371658 813 ntTSL 318.9■□□□□ 0.621e-9■□□□□ 9
NCBP2P52298 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.61e-9■□□□□ 9
NCBP2P52298 COCH-206ENST00000553772 554 ntTSL 418.51■□□□□ 0.555e-6■□□□□ 9
NCBP2P52298 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.27■□□□□ 0.521e-9■□□□□ 9
NCBP2P52298 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.27■□□□□ 0.525e-6■□□□□ 9
NCBP2P52298 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.55e-6■□□□□ 9
NCBP2P52298 MOGS-204ENST00000448666 1616 ntTSL 1 (best)17.94■□□□□ 0.461e-9■□□□□ 9
NCBP2P52298 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.09■□□□□ 0.335e-6■□□□□ 9
NCBP2P52298 MOGS-207ENST00000462443 532 ntTSL 216.88■□□□□ 0.291e-9■□□□□ 9
NCBP2P52298 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.271e-9■□□□□ 9
NCBP2P52298 UBE2E1-208ENST00000481622 432 ntTSL 516.7■□□□□ 0.265e-6■□□□□ 9
NCBP2P52298 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.87■□□□□ 0.136e-7■□□□□ 9
NCBP2P52298 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.27■□□□□ 0.045e-6■□□□□ 9
NCBP2P52298 UBE2E1-209ENST00000484048 786 ntTSL 315.11■□□□□ 0.015e-6■□□□□ 9
NCBP2P52298 UBE2E1-211ENST00000495141 582 ntTSL 215.1■□□□□ 0.015e-6■□□□□ 9
NCBP2P52298 ASPSCR1-207ENST00000579684 564 ntTSL 314.74□□□□□ -0.051e-9■□□□□ 9
NCBP2P52298 ELL-204ENST00000596915 623 ntTSL 314.66□□□□□ -0.065e-6■□□□□ 9
NCBP2P52298 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.15e-6■□□□□ 9
NCBP2P52298 ECHDC2-226ENST00000544531 548 ntTSL 414.32□□□□□ -0.125e-6■□□□□ 9
NCBP2P52298 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.155e-6■□□□□ 9
NCBP2P52298 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-6■□□□□ 9
NCBP2P52298 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.155e-6■□□□□ 9
NCBP2P52298 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.25e-6■□□□□ 9
NCBP2P52298 NAA40-203ENST00000534965 958 ntTSL 213.79□□□□□ -0.25e-6■□□□□ 9
NCBP2P52298 MOGS-203ENST00000414701 520 ntTSL 313.46□□□□□ -0.251e-9■□□□□ 9
NCBP2P52298 ELL-202ENST00000594635 4074 ntTSL 1 (best)13.31□□□□□ -0.285e-6■□□□□ 9
NCBP2P52298 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.96□□□□□ -0.335e-6■□□□□ 9
NCBP2P52298 NAA40-208ENST00000544138 808 ntTSL 412.43□□□□□ -0.425e-6■□□□□ 9
NCBP2P52298 RPS29-207ENST00000557367 499 ntTSL 212.23□□□□□ -0.456e-7■□□□□ 9
NCBP2P52298 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.465e-6■□□□□ 9
NCBP2P52298 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC11.76□□□□□ -0.535e-6■□□□□ 9
NCBP2P52298 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.545e-6■□□□□ 9
NCBP2P52298 DNAJC11-205ENST00000460594 581 ntTSL 311.47□□□□□ -0.575e-6■□□□□ 9
NCBP2P52298 DNAJC11-210ENST00000473993 755 ntTSL 511.47□□□□□ -0.575e-6■□□□□ 9
NCBP2P52298 NAA40-204ENST00000536939 567 ntTSL 211.03□□□□□ -0.645e-6■□□□□ 9
NCBP2P52298 DNAJC11-207ENST00000465911 745 ntTSL 29.92□□□□□ -0.825e-6■□□□□ 9
NCBP2P52298 NAA40-201ENST00000338447 4707 ntTSL 1 (best)9.8□□□□□ -0.845e-6■□□□□ 9
NCBP2P52298 ZNF670-ZNF695-201ENST00000465049 1042 ntAPPRIS P5 TSL 59.65□□□□□ -0.865e-6■□□□□ 9
NCBP2P52298 RPS29-208ENST00000557519 333 ntTSL 38.99□□□□□ -0.975e-6■□□□□ 9
NCBP2P52298 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.025e-6■□□□□ 9
NCBP2P52298 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.61□□□□□ -1.035e-6■□□□□ 9
NCBP2P52298 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.56□□□□□ -1.045e-6■□□□□ 9
NCBP2P52298 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.075e-6■□□□□ 9
NCBP2P52298 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.092e-22■□□□□ 9
NCBP2P52298 RPS29-204ENST00000554075 826 ntTSL 1 (best)8.01□□□□□ -1.136e-7■□□□□ 9
NCBP2P52298 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.165e-6■□□□□ 9
NCBP2P52298 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.165e-6■□□□□ 9
NCBP2P52298 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.42□□□□□ -1.225e-6■□□□□ 9
NCBP2P52298 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.225e-6■□□□□ 9
NCBP2P52298 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.19□□□□□ -1.266e-7■□□□□ 9
NCBP2P52298 RPS29-205ENST00000556230 624 ntTSL 1 (best)7.17□□□□□ -1.266e-7■□□□□ 9
NCBP2P52298 DNAJC11-211ENST00000485073 613 ntTSL 27.08□□□□□ -1.285e-6■□□□□ 9
NCBP2P52298 DNAJC11-203ENST00000426784 975 ntTSL 37.01□□□□□ -1.295e-6■□□□□ 9
NCBP2P52298 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.446e-7■□□□□ 9
NCBP2P52298 HGD-202ENST00000466528 444 ntTSL 25.78□□□□□ -1.482e-22■□□□□ 9
NCBP2P52298 HGD-206ENST00000480862 656 ntTSL 25.57□□□□□ -1.522e-22■□□□□ 9
NCBP2P52298 HGD-207ENST00000485313 528 ntTSL 55.48□□□□□ -1.532e-22■□□□□ 9
NCBP2P52298 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.65e-6■□□□□ 9
NCBP2P52298 HGD-205ENST00000476082 462 ntTSL 54.46□□□□□ -1.72e-22■□□□□ 9
NCBP2P52298 HGD-208ENST00000488183 572 ntTSL 43.43□□□□□ -1.862e-22■□□□□ 9
NCBP2P52298 FKBP14-203ENST00000419018 1085 ntTSL 1 (best)3.34□□□□□ -1.875e-6■□□□□ 9
NCBP2P52298 FKBP14-204ENST00000479939 751 ntTSL 1 (best)2.99□□□□□ -1.935e-6■□□□□ 9
NCBP2P52298 PROC-204ENST00000419985 500 ntTSL 420.22■□□□□ 0.839e-8■□□□□ 9
NCBP2P52298 PROC-208ENST00000442644 600 ntTSL 318.07■□□□□ 0.489e-8■□□□□ 9
NCBP2P52298 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.219e-8■□□□□ 9
NCBP2P52298 PROC-206ENST00000429925 581 ntTSL 313.36□□□□□ -0.279e-8■□□□□ 9
NCBP2P52298 PROC-210ENST00000474030 501 ntTSL 410.22□□□□□ -0.779e-8■□□□□ 9
NCBP2P52298 HMG20B-209ENST00000470356 806 ntTSL 1 (best)28.44■■■□□ 2.144e-6■□□□□ 9
NCBP2P52298 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.114e-6■□□□□ 9
NCBP2P52298 HMG20B-201ENST00000262949 886 ntTSL 520.94■□□□□ 0.944e-6■□□□□ 9
NCBP2P52298 HMG20B-205ENST00000435022 616 ntTSL 520.17■□□□□ 0.824e-6■□□□□ 9
NCBP2P52298 HMG20B-203ENST00000416526 711 ntTSL 320.07■□□□□ 0.84e-6■□□□□ 9
NCBP2P52298 MTMR3-212ENST00000495098 461 ntTSL 419.8■□□□□ 0.764e-6■□□□□ 9
NCBP2P52298 HMG20B-206ENST00000453933 759 ntTSL 219.45■□□□□ 0.74e-6■□□□□ 9
NCBP2P52298 HMG20B-204ENST00000417382 561 ntTSL 419.42■□□□□ 0.74e-6■□□□□ 9
NCBP2P52298 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)18.25■□□□□ 0.514e-6■□□□□ 9
NCBP2P52298 MTMR3-207ENST00000445401 665 ntTSL 313.92□□□□□ -0.184e-6■□□□□ 9
NCBP2P52298 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.244e-6■□□□□ 9
NCBP2P52298 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.29□□□□□ -0.444e-6■□□□□ 9
NCBP2P52298 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.614e-6■□□□□ 9
NCBP2P52298 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.07□□□□□ -0.644e-6■□□□□ 9
Retrieved 100 of 18,329 protein–RNA pairs in 220.7 ms