Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKBP51801 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKBP51801 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CLCNKBP51801 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKBP51801 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKBP51801 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.9■□□□□ 0.46
CLCNKBP51801 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.9■□□□□ 0.46
CLCNKBP51801 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCNKBP51801 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLCNKBP51801 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCNKBP51801 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
CLCNKBP51801 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CLCNKBP51801 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCNKBP51801 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLCNKBP51801 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKBP51801 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.89■□□□□ 0.46
CLCNKBP51801 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCNKBP51801 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKBP51801 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCNKBP51801 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCNKBP51801 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 MIR770-201ENST00000390219 98 ntBASIC17.89■□□□□ 0.45
CLCNKBP51801 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCNKBP51801 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCNKBP51801 FAM86GP-201ENST00000448322 971 ntBASIC17.89■□□□□ 0.45
CLCNKBP51801 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCNKBP51801 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 AP000842.3-202ENST00000569238 1080 ntBASIC17.89■□□□□ 0.45
CLCNKBP51801 AP001059.3-201ENST00000619053 235 ntBASIC17.89■□□□□ 0.45
CLCNKBP51801 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLCNKBP51801 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKBP51801 SNX33P1-201ENST00000592116 1762 ntBASIC17.89■□□□□ 0.45
CLCNKBP51801 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKBP51801 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCNKBP51801 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCNKBP51801 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLCNKBP51801 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 MIR346-201ENST00000362234 95 ntBASIC17.88■□□□□ 0.45
CLCNKBP51801 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCNKBP51801 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AL512356.2-201ENST00000546955 174 ntBASIC17.88■□□□□ 0.45
CLCNKBP51801 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AC026150.2-201ENST00000564693 1156 ntBASIC17.88■□□□□ 0.45
CLCNKBP51801 AC015911.4-201ENST00000588022 1070 ntBASIC17.88■□□□□ 0.45
CLCNKBP51801 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCNKBP51801 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLCNKBP51801 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCNKBP51801 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCNKBP51801 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKBP51801 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms