Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLCSP50747 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 AC243591.1-201ENST00000452967 1364 ntBASIC16.17■□□□□ 0.18
HLCSP50747 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.17■□□□□ 0.18
HLCSP50747 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.17■□□□□ 0.18
HLCSP50747 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.17■□□□□ 0.18
HLCSP50747 PRYP5-201ENST00000451909 266 ntBASIC16.17■□□□□ 0.18
HLCSP50747 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
HLCSP50747 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLCSP50747 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
HLCSP50747 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.17■□□□□ 0.18
HLCSP50747 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLCSP50747 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLCSP50747 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 HYMAI-201ENST00000635591 3347 ntBASIC16.16■□□□□ 0.18
HLCSP50747 AC092850.2-201ENST00000623821 2697 ntBASIC16.16■□□□□ 0.18
HLCSP50747 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLCSP50747 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLCSP50747 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.16■□□□□ 0.18
HLCSP50747 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLCSP50747 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLCSP50747 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
HLCSP50747 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 BX005266.1-201ENST00000473402 457 ntBASIC16.16■□□□□ 0.18
HLCSP50747 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.16■□□□□ 0.18
HLCSP50747 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.16■□□□□ 0.18
HLCSP50747 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.16■□□□□ 0.18
HLCSP50747 AC116407.3-201ENST00000623905 1129 ntBASIC16.16■□□□□ 0.18
HLCSP50747 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 AC078925.2-201ENST00000624013 1973 ntBASIC16.16■□□□□ 0.18
HLCSP50747 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLCSP50747 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
HLCSP50747 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLCSP50747 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HLCSP50747 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HLCSP50747 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HLCSP50747 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLCSP50747 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 RNF216P1-203ENST00000404404 2427 ntBASIC16.15■□□□□ 0.18
HLCSP50747 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HLCSP50747 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.15■□□□□ 0.18
HLCSP50747 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
HLCSP50747 AL020989.1-201ENST00000422979 469 ntBASIC16.15■□□□□ 0.18
HLCSP50747 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.15■□□□□ 0.18
HLCSP50747 AC019129.2-201ENST00000609837 1235 ntBASIC16.15■□□□□ 0.18
HLCSP50747 AC107918.4-202ENST00000641623 219 ntBASIC16.15■□□□□ 0.18
HLCSP50747 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLCSP50747 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.15■□□□□ 0.18
HLCSP50747 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.15■□□□□ 0.18
HLCSP50747 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLCSP50747 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms