Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FRMD8P1-201ENST00000440433 1524 ntBASIC17.98■□□□□ 0.47
SSR1P43307 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SSR1P43307 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSR1P43307 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SSR1P43307 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.98■□□□□ 0.47
SSR1P43307 HCG4P8-203ENST00000443049 980 ntBASIC17.98■□□□□ 0.47
SSR1P43307 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.98■□□□□ 0.47
SSR1P43307 NUS1P1-201ENST00000446295 882 ntBASIC17.98■□□□□ 0.47
SSR1P43307 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.98■□□□□ 0.47
SSR1P43307 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SSR1P43307 MIR3652-201ENST00000579335 131 ntBASIC17.98■□□□□ 0.47
SSR1P43307 AL732292.2-201ENST00000609649 430 ntBASIC17.98■□□□□ 0.47
SSR1P43307 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.98■□□□□ 0.47
SSR1P43307 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSR1P43307 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
SSR1P43307 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.98■□□□□ 0.47
SSR1P43307 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSR1P43307 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
SSR1P43307 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SSR1P43307 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 AL118508.1-201ENST00000613502 2345 ntBASIC17.97■□□□□ 0.47
SSR1P43307 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 BX005266.1-201ENST00000473402 457 ntBASIC17.97■□□□□ 0.47
SSR1P43307 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SSR1P43307 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.97■□□□□ 0.47
SSR1P43307 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSR1P43307 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSR1P43307 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.97■□□□□ 0.47
SSR1P43307 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
SSR1P43307 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
SSR1P43307 AL136379.1-201ENST00000623471 2642 ntBASIC17.96■□□□□ 0.47
SSR1P43307 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SSR1P43307 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.96■□□□□ 0.47
SSR1P43307 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.96■□□□□ 0.47
SSR1P43307 AP001269.4-201ENST00000609611 512 ntBASIC17.96■□□□□ 0.47
SSR1P43307 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms